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Conversion of natural language lab protocols for iterative design-build-test-learn cycles to literate protocols using teemi.
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posted on 2024-03-08, 18:40 authored by Søren D. Petersen, Lucas Levassor, Christine M. Pedersen, Jan Madsen, Lea G. Hansen, Jie Zhang, Ahmad K. Haidar, Rasmus J. N. Frandsen, Jay D. Keasling, Tilmann Weber, Nikolaus Sonnenschein, Michael K. JensenNatural language protocols (left—blue) comprehensible to humans are converted into computer code (right—yellow) that can be understood by both computers and humans. In teemi, each procedure in natural language protocols is connected with names of python modules in literate protocols, thus lowering the programming entry level needed for adopting teemi. See also S1 Fig for more details. Created with Biorender.com.
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