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Comparison of the linearized P. veronii chromosome 1 replicon (Pv) to P. fluorescens SBW25 (Pf, Acc. No. AM181176.4) and P. syringae pv. syringae B728a (Ps, CP000075.1).

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posted on 03.11.2016, 17:49 by Marian Morales, Vladimir Sentchilo, Claire Bertelli, Andrea Komljenovic, Nadezda Kryuchkova-Mostacci, Audrey Bourdilloud, Burkhard Linke, Alexander Goesmann, Keith Harshman, Francisca Segers, Fabien Delapierre, Damien Fiorucci, Mathieu Seppey, Evgeniya Trofimenco, Pauline Berra, Athimed El Taher, Chloé Loiseau, Dejan Roggero, Madeleine Sulfiotti, Angela Etienne, Gustavo Ruiz Buendia, Loïc Pillard, Angelique Escoriza, Roxane Moritz, Cedric Schneider, Esteban Alfonso, Fatma Ben Jeddou, Oliver Selmoni, Gregory Resch, Gilbert Greub, Olivier Emery, Manupriyam Dubey, Trestan Pillonel, Marc Robinson-Rechavi, Jan Roelof van der Meer

Purple and cyan blocks show the location and orientation of coding regions on the positive and negative strands, respectively. Red and blue lines indicate direct and inverted colinear regions between both replicons, respectively, using a threshold of percentage nucleotide identity of 75%, maximum e-value for the region comparison of 1×10−10, and minimum overlap length for display of 1 kb. Plot generated with GenoPlotR [47].

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