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Cluster analysis of RRBS DNA methylation analysis using “correlation” distance with”ward.D” clustering method with 10000 bootstrap.

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posted on 2022-04-21, 17:41 authored by Nejla Ozirmak Lermi, Stanton B. Gray, Charles M. Bowen, Laura Reyes-Uribe, Beth K. Dray, Nan Deng, R. Alan Harris, Muthuswamy Raveendran, Fernando Benavides, Carolyn L. Hodo, Melissa W. Taggart, Karen Colbert Maresso, Krishna M. Sinha, Jeffrey Rogers, Eduardo Vilar

Gray values represent the rank of the cluster and the highest rank is 26 for this cluster. Red values indicate approximately unbiased (au) P-value and green values show bootstrap probability (bp). The minimum au value is 96, which proves that the clusters are valid (P-value<0.05).