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Analysis of the first batch of samples received from FIND.

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posted on 12.10.2020, 17:33 by Claudia Sala, Andrej Benjak, Delia Goletti, Sayera Banu, Jesica Mazza-Stadler, Katia Jaton, Philippe Busso, Sille Remm, Marion Leleu, Jacques Rougemont, Fabrizio Palmieri, Gilda Cuzzi, Ornella Butera, Valentina Vanini, Senjuti Kabir, S. M. Mazidur Rahman, Laurent Nicod, Stewart T. Cole

A. Heatmap of Phylum abundances across samples. Hierarchical clustering did not segregate the data according to disease (TB in violet, non-TB in green) nor to the region of origin. B. PCoA (PC1 vs. PC2) displaying all of the samples, colored according to the country. The different shapes (triangle or circle) indicate TB and non-TB samples, respectively. No segregation could be observed. The percentage of variance explained for the first components is shown in the inset.

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