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Additional file 1: Figure S1. of Detection and phylogenetic analysis of porcine epidemic diarrhea virus in central China based on the ORF3 gene and the S1 gene

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posted on 2016-11-25, 05:00 authored by Yunfang Su, Yunchao Liu, Yumei Chen, Baolei Zhao, Pengchao Ji, Guangxu Xing, Dawei Jiang, Chang Liu, Yapeng Song, Guoqiang Wang, Dongliang Li, Ruiguang Deng, Gaiping Zhang
Phylogenetic analysis of the S1 amino acid sequences of 21 PEDV isolates, including the reference strains. The trees were constructed by the neighbour-joining method in MEGA 6. Bootstrap values were indicated for each node from 1000 replicates. The names of the strains, years and places of isolation and GenBank accession numbers proposed are shown in Tables 2 and 3. ‘●’ indicates the strains in this study. The phylogenetic analysis of CH/HNLY (with 4-aa insertion/deletion (RSSS/T) at position 375 and 1-aa (D) deletion at position 430) was showed. (TIF 2238 kb)

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Zhengzhou University

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