publication_data_CalCEN_v1.0.0_20201230.tar.gz (961.6 MB)
publication_data_CalCEN_v1.0.0_20201230.tar.gz
Data for
TR O'Meara, MJ O'Meara, M Sphere, 2020
DeORFanizing Candida albicans Genes using Co-Expression
Code available at
http://github.com/momeara/CalCEN
Candida Albicans Co-Expression Network (CalCEN) version 1.0.0
Files
chromsome_features.tsv
- Candida albicans SC5314chromsome features collected from Candida Genome Database 12-Jun 2018
genes.tsv
- Curated set of 6226 genes use in this study
expression_runs.tsv
- Curated set of RNA-seq runs used in this study
estimated_expression.tsv
- gene by RNA-seq run expression levels
CalCEN_network.tsv
- Co-expression network
blastp_network.tsv
- blastp sequence similarity network
sac_gene.tsv
- genetic associations between orthologous Sac genes Network
sac_gene.tsv
- physical protein-protein interaction between orthologous Sac genes Network
yeast_net_network.tsv
- YeastNet between orthologous Sac genes network
go_annotations.tsv
- GO annotations from Candida Genome Database collected 12-Jun 2018
gba_summary.tsv
- Summary of guilt-by-association gene-function prediction