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data.bond

Version 2 2025-03-25, 13:27
Version 1 2025-03-24, 16:06
dataset
posted on 2025-03-25, 13:27 authored by Mauricio R. Bonilla, Sridhar K. Kannam, Monika DoblinMonika Doblin, Tony BacicTony Bacic, Jason R. Stokes

This dataset includes three files, which are enough to reproduce all the simulations in our work:

1- create_chains.py: This Python script allows the creation of a lammps data file. create_chains.py --h offers a complete list of the options available. The length of the chains, the number of chains, and the degree of out-of-plane and in-plane anisotropy can be set up through this script.

2- in_chain: lammps input file for executing the simulations at the default set of parameters.

3- data_lammps: sample lammps data file.


Funding

This work was funded by a grant from the Australia Research Council to the ARC Centre of Excellence in Plant Cell Walls (CE1101007) and the Victorian Life Sciences Computation Initiative (VLSCI) on its Peak Computing Facility at the University of Melbourne. We thank Dr. Daniel Oehme for fruitful discussions.

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