TE families enriched for genes up-regulated in response to abiotic stress.
dataset
posted on 2015-01-08, 03:30 authored by Irina Makarevitch, Amanda J. Waters, Patrick T. West, Michelle Stitzer, Candice N. Hirsch, Jeffrey Ross-Ibarra, Nathan M. Springera<p>Number of expressed genes with a TE insertion within 1 kb from the transcription start site.</p>b<p>Percent of up-regulated genes relative to all expressed genes with a TE insertion. <sup>c</sup>Fold enrichment values (F.E.) for TE families are calculated relative to up-regulated genes among all expressed genes under the same stress condition. <sup>d</sup>Log<sub>2</sub>(stress/control) was calculated from aggregated read counts for corresponding TE families and represent the level of stress-induced up-regulation of the TE from a certain family.</p><p>TE families enriched for genes up-regulated in response to abiotic stress.</p>
History
Related Materials
- 1. DOI - Is supplement to Transposable Elements Contribute to Activation of Maize Genes in Response to Abiotic Stress
