Table_1.xls (5.5 kB)

Distances between the Zn atom and its coordinating atomsa.

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posted on 21.12.2011, 00:10 by Peter M. Jones, Mark W. Robinson, John P. Dalton, Anthony M. George
a

Mean values and standard deviations are in Å.

b

Distance between Zn and the ligand backbone carbonyl oxygen of the scissile bond.

c

Mean values and standard deviations obtained by averaging over 9 PDB structures of aminopeptidase N: P. falciparum (3EBH, 3EBI, 3EBG; [15]), E. coli (2ZXG; [24]), E. coli (2HPT, 2HPO; [17]), E. coli (2DQM, 2DQ6; [16]), N. meningitidis (2GTQ; [18]). The protein atom-Zn distances are the means of 9 measurements, while the water molecule distance is the mean distance measured from 4 unliganded structures.

d

From PfA-M1 simulations, distances sampled every 50 ps over the 75 ns simulations.

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