Wild Chinese chestnut genome (V2)

Name: Wild Chinese chestnut genome (V2)
Published: 2024-12-27T03:28:09+00:00
License: https://creativecommons.org/licenses/by/4.0/
Keywords: New version genome and annotation of chestnut

dataset

posted on 2024-12-27, 03:28 authored by Xinghua NieXinghua Nie

We assembled a chromosome-scale genome of wild Chinese chestnut, and a total of 2,652,199 read pairs (90.55 Gb) were acquired by Hi-C sequencing, offering over 115-fold coverage. Then, to improve gene prediction accuracy, high-quality transcripts of 11 mixed tissue types were sequenced using a single-molecule real-time sequencer from Pacific Biosciences. Finally, a total of 33,991 protein-coding genes were aligned to the wild Chinese chestnut genome (V2).