WDL 101 Dataset

This is the entire set of input data needed to run the workflow on : https://hutchdatascience.org/WDL_Workflows_Guide/

The list of files here are :

1. Homo_sapiens_assembly19.fasta
2. Homo_sapiens_assembly19.fasta.fai
3. Homo_sapiens_assembly19.dict
4. Homo_sapiens_assembly19.fasta.pac
5. Homo_sapiens_assembly19.fasta.sa
6. Homo_sapiens_assembly19.fasta.amb
7. Homo_sapiens_assembly19.fasta.ann
8. Homo_sapiens_assembly19.fasta.bwt
9. dbsnp_138.b37.vcf.gz.tbi
10. dbsnp_138.b37.vcf.gz
11. Mills_and_1000G_gold_standard.indels.b37.sites.vcf.idx
12. Mills_and_1000G_gold_standard.indels.b37.sites.vcf
13. af-only-gnomad.raw.sites.b37.vcf.gz
14. af-only-gnomad.raw.sites.b37.vcf.gz.tbi
15. Tumor_1_KRAS_CALU1_combined_final.fastq
16. Tumor_2_EGFR_HCC4006_combined.fastq
17. Normal_1_MOLM13_combined_final.fastq
18. Normal_2_MOLM13_combined_final.fastq