<p dir="ltr">This is the entire set of input data needed to run the workflow on : https://hutchdatascience.org/WDL_Workflows_Guide/</p><p dir="ltr">The list of files here are : </p><ol><li>Homo_sapiens_assembly19.fasta</li><li>Homo_sapiens_assembly19.fasta.fai</li><li>Homo_sapiens_assembly19.dict</li><li>Homo_sapiens_assembly19.fasta.pac</li><li>Homo_sapiens_assembly19.fasta.sa</li><li>Homo_sapiens_assembly19.fasta.amb</li><li>Homo_sapiens_assembly19.fasta.ann</li><li>Homo_sapiens_assembly19.fasta.bwt</li><li>dbsnp_138.b37.vcf.gz.tbi</li><li>dbsnp_138.b37.vcf.gz</li><li>Mills_and_1000G_gold_standard.indels.b37.sites.vcf.idx</li><li>Mills_and_1000G_gold_standard.indels.b37.sites.vcf</li><li>af-only-gnomad.raw.sites.b37.vcf.gz</li><li>af-only-gnomad.raw.sites.b37.vcf.gz.tbi</li><li>Tumor_1_KRAS_CALU1_combined_final.fastq</li><li>Tumor_2_EGFR_HCC4006_combined.fastq</li><li>Normal_1_MOLM13_combined_final.fastq</li><li>Normal_2_MOLM13_combined_final.fastq</li></ol><p></p>