Virtual Genome Walking in Ambystoma mexicanum

VGW scaffold sequences, input cDNAs and related GFF files. Files included:<div><br></div><div>VGWmerged.fasta The merged VGW scaffolds</div><div>Annotated_cDNA.fasta The input cDNA transcripts</div><div>vgw.gff The input cDNAs mapped to the scaffolds</div><div>alltranscripts.gff All of our transcripts mapped to the scaffolds</div><div>500Ns.gff The 500N breaks between contigs</div><div>VGWmerged.fasta_RM_out.gff RepeatMasker output</div><div>coverage_repeats.gff positions where read coverage exceeds 50 </div><div>consensi.fa.classified repeat library generated by RepeatScout</div>