Table S4.xls (26 kB)
The most prophage dense complete bacterial genomes, with details on the methods used for sequencing and assembly
dataset
posted on 2022-04-07, 11:55 authored by Crystal Frost, Stefanos SioziosStefanos Siozios, Pol Nadal Jimenez, Michael Brockhurst, Kayla King, Alistair Darby, Greg HurstGreg HurstProphage-dense existing completed genomes.
Column A: Genome Assembly ID
Column B: # main chrososome contigs
Column C: Genome size (bp)
Column D: Genome %GC
Column E-H: # Regions predicted to have phage origins:
| E: Complete, F, Questionable G, Incomplete, H total. Column I: Density of regions with phage origin (#/Mb) Column J: Notes on any plasmids present, and their predicted phage content. Column K, L: First Generation sequencing, Library prep, sequencing method. Column M: Second generation sequencing effort Column N: Third generation sequencing effort (nanopore, PacBio) Column O: Targetted Gap closure approach Column P: Backbone used for assembly, if any Column Q: Year of publication/completion Column R: Reference |
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