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The Modern Synthesis and “Progress” in Evolution: Topic Models and Analyses

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posted on 2024-09-19, 10:15 authored by Charles PenceCharles Pence

Progress in Evolution

License

  • The code present in `code` is licensed under the GNU GPL v3.
  • All other data and figures present here are released under CC-BY 4.0.

ERRATUM

Note that the year indicators in the `corpus_dates.pickle` files were incorrectly generated; they were corrected in the final figures published with the article, as well as the output analysis files like `docs-for-topics.txt` and `progress-in-topics.txt`.

Code

A static version of the code that we used to generate the topic models is preserved here in the `code` directory. The latest version of that code, called `quick-topic`, is kept in a repository here:

https://codeberg.org/cpence/quick-topic

If this repository is moved or closed, please look for future versions of this code at <https://codeberg.org/cpence/> or <https://codeberg.org/pencelab/>.

Corpus

Note that not all files in this directory will work as expected, because the original, full-text journal articles cannot be uploaded here due to copyright provisions. Please contact us if you would like to make an arrangement to access this data.

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