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SpeciesInteractions_EID2

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Version 5 2015-07-31, 08:52
Version 4 2015-07-31, 08:52
Version 3 2015-07-31, 08:51
Version 2 2015-05-27, 17:01
dataset
posted on 2015-07-31, 08:52 authored by Maya WardehMaya Wardeh, Claire Risley, Marie McIntyre, Christian Setzkorn, Matthew Baylis

Species interactions contained in this dataset indicate the possibility of one species (Cargo) having an interaction with another species (Carrier). 

This dataset comprises the following fields:

1 Cargo: name of cargo species.

2 Cargo classification: the taxonomic classification of the cargo (e.g. bacteria, virus, etc.)

3 Carrier: name of carrier species.

4 Carrier classification: the taxonomic classification of the carrier (e.g. human, domestic, primates, mammals, etc.)

5 Sequences count: Total number of nucleotide sequences supporting the interaction.

6 Publication count: Total number of PubMed publications supporting the interaction.

7 Sequences: semi colon separated list of the nucleotide sequence identifiers (GIs) that can be used to retrieve these sequences from the NCBI Nucleotide database. For readability purposes this list was restricted to a maximum of 100 identifiers.

8 Publications: semi colon separated list of the PubMed citation identifiers (PMIDs) that can be used to retrieve these publications from the NCBI PubMed database. For readability purposes this list was restricted to a maximum of 100 identifiers.

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