3 files

Skull-stripped MRI GBM Datasets (and Segmentations)

posted on 17.06.2019, 07:18 by Lydia Lindner, Daniel Wild, Maximilian Weber, Malgorzata Kolodziej, Gord von Campe, Jan Egger
Skull-stripped MRI GBM Datasets. Please use the following citations if you use them in your work:

L. Lindner, D. Wild, M. Weber, M. Kolodziej, G. von Campe, J. Egger. Skull-stripped MRI GBM Datasets. Figshare, 2018.

J. Egger, et al. GBM Volumetry using the 3D Slicer Medical Image Computing Platform. Sci Rep., 3:1364, 2013.

Further Information:

Ten Contrast-enhanced T1-Weighted MRI Datasets from Patients with pathologically confirmed Glioblastoma Multiforme (GBM) and Manual Expert Segmentations from Neurosurgeons.

All Datasets are skull-stripped and reformatted to have 260 slices in axial direction. Datasets with a sagittal or coronal scanning direction have been reformatted to an axial direction.

Note: Only the enhancing tumor and the necrotic core were segmented, since these are currently the areas of main interest in clinical practice. Other regions, such as a surrounding edema, are typically not delineated in clinical routine, since these annotations do often not accurately reflect the true state.


Austrian Science Fund (FWF) KLI 678-B31

CAMed (COMET K-Project 871132) which is funded by the Austrian Federal Ministry of Transport, Innovation and Technology (BMVIT) and the Austrian Federal Ministry for Digital and Economic Affairs (BMDW) and the Styrian Business Promotion Agency (SFG).