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Scaffolds constructed for Argyrosomus japonicus and the annotation data

dataset
posted on 2025-02-06, 07:40 authored by TASSIN KIM JacksonTASSIN KIM Jackson

The genome of a South African conspecific of Argyrosomus japonicus (dusky kob) was assembled and annotated using Illumina data from both Mate-Pair and Paired-end sequencing. Ion Torrent data was utilized for tasks such as gap closure, scaffolding, and error correction. The assembly of the draft genome employed the MaSuRCA software, while annotation was performed with Braker2 using a combination of homology-based and de novo approaches.

Funding

MCR180616347589

History

Publisher

Stellenbosch University

Contributor

Jackson, TK.

Date

2024-03-14

Format

.pdf .faa .fa

Language

en

Geographical Location

South Africa

Academic Group

  • Science

Recommended Citation

Jackson, TK. 2024. Scaffolds constructed for Argyrosomus japonicus and the annotation data. Stellenbosch University. Dataset. DOI: https://doi.org/10.25413/sun.24161007

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  • Goal 14​: LIFE BELOW WATER

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