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Salmonella Typhi H58 MinION and Illumina data

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posted on 21.10.2014, 09:33 by Philip AshtonPhilip Ashton, Justin O'gradyJustin O'grady

Here, we report the use of the MinION to resolve the structure of a composite transposon, encoding multidrug resistance, in Salmonella Typhi Haplotype 58 - a multidrug resistant strain that has undergone global expansion. MinION data from a single 18-hour run was used to scaffold Illumina data and identify the chromosomal insertion site and structure of the island.

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