Role of TGF Beta and PPAR Alpha Signaling Pathways in Radiation Response of Locally Exposed Heart: Integrated Global Transcriptomics and Proteomics Analysis
datasetposted on 02.11.2016, 00:00 by Vikram Subramanian, Ingar Seemann, Juliane Merl-Pham, Stefanie M. Hauck, Fiona A. Stewart, Michael J. Atkinson, Soile Tapio, Omid Azimzadeh
Epidemiological data from patients undergoing radiotherapy for thoracic tumors clearly show the damaging effect of ionizing radiation on cardiovascular system. The long-term impairment of heart function and structure after local high-dose irradiation is associated with systemic inflammatory response, contraction impairment, microvascular damage, and cardiac fibrosis. The goal of the present study was to investigate molecular mechanisms involved in this process. C57BL/6J mice received a single X-ray dose of 16 Gy given locally to the heart at the age of 8 weeks. Radiation-induced changes in the heart transcriptome and proteome were investigated 40 weeks after the exposure. The omics data were analyzed by bioinformatics tools and validated by immunoblotting. Integrated network analysis of transcriptomics and proteomics data elucidated the signaling pathways that were similarly affected at gene and protein level. Analysis showed induction of transforming growth factor (TGF) beta signaling but inactivation of peroxisome proliferator-activated receptor (PPAR) alpha signaling in irradiated heart. The putative mediator role of mitogen-activated protein kinase cascade linking PPAR alpha and TGF beta signaling was supported by data from immunoblotting and ELISA. This study indicates that both signaling pathways are involved in radiation-induced heart fibrosis, metabolic disordering, and impaired contractility, a pathophysiological condition that is often observed in patients that received high radiation doses in thorax.
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omics dataradiation-induced heart fibrosisPPAR Alpha Signaling Pathwaysperoxisome proliferator-activated receptor16 Gymicrovascular damageheart transcriptomepathwayRadiation ResponseRadiation-induced changesIntegrated network analysiscontraction impairmenthigh-dose irradiationTGF betaprotein levelproteomics dataTGF BetaProteomics Analysisbioinformatics toolsgrowth factorX-ray dosethoracic tumorsmediator role8 weeksradiation dosesIntegrated Global TranscriptomicsExposed HeartELISAheart functionC 57BL micepathophysiological conditionmitogen-activated protein kinase cascadeimmunoblotting40 weeks