Recombination-mediated host-adaptation by avian Staphylococcus aureus

Supplementary tables for 'Recombination-mediated host-adaptation by avian Staphylococcus aureus'  by Murray et al.

Figure S1: Genetic relatedness of S. aureus isolates from different hosts alongside visualisation of recombination events identified by BRAT NG analysis.

Figure S2: Individual neighbour joining phylogenetic trees of all 47 chicken-associated accessory genes and 33 genes that contain recombination regions.

Table S1: List of isolates used in this study.

Table S2: List of all chicken-associated genes (47) and genes containing recombination regions (33). Function of the genes was predicted using RAST and NCBI BLAST.

Table S3: The number of polymorphic sites found in each chicken-associated allele from CC5, 398, 1 and 385.