Proteomic/metabolic data and mathematical model of nitrogen assimilation

Version 3 2018-12-18, 07:30

Version 2 2017-05-30, 07:14

Version 1 2017-04-16, 19:03

dataset

posted on 2018-12-18, 07:30 authored by Adam GosztolaiAdam Gosztolai, Jörg Schumacher, Volker Behrends, Jacob G Bundy, Martin Buck, Mauricio Barahona, Franziska Heydenreich, Mark H Bennett

Experimental data and mathematical model accompanying the paper 'GlnK facilitates the dynamic regulation of bacterial nitrogen assimilation' by Gosztolai et al. (2017) Biophys J.

Data.xlsx contains concurrent in vivo time-courses of metabolite, total protein and PTM protein concentrations in response to time-varying external ammonium levels.

Model.txt contains the mathematical model in the paper in SBML language.

Funding

BBSRC (BB/M011178/1), EPSRC (EP/N014529/1 and EP/I032223/1)

History

Usage metrics

Keywords

nitrogen assimilation pathway Predictive models proteomics experiments post-translational modulation glnbk in vivo recording Systems Biology Proteomics and Intermolecular Interactions (excl. Medical Proteomics)

Licence

CC BY 4.0

Exports

RefWorks

BibTeX

Ref. manager

Endnote

DataCite

NLM