PharmacotherapyDB 1.0: the open catalog of drug therapies for disease
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Indications were classified by physician curators into three categories:
DM-- disease modifying
indications.tsvcontains drug–disease pairs and their consensus category (
n_curatorsrefers to how many of the three curators initially assigned the consensus classification.
n_resourcesrefers to how many of the four resources (MEDI-HPS, LabeledIn, EHRLink, PREDICT) included the indication.
diseases.tsvcontains a list of diseases with indications. For each disease, the number of indications per category is provided.
drugs.tsvcontains a list of drugs with indications. For each drug, the number of indications per category is provided.
catalog.xlsxis a spreadsheet with four sheets:
indications— data from
diseases— data from
drugs— data from
curation— the classifications from each of the three physician curators (