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Paraphelidium tribonemae v1

Version 2 2017-12-14, 10:09
Version 1 2017-12-14, 10:08
dataset
posted on 2017-12-14, 10:09 authored by Guifré TorruellaGuifré Torruella
Metatranscriptome of Paraphelidium tribonemae (PRJNA402032) assembled with trinity, cleaned from non-eukaryote sequences using blobtools with the refseq taxonomy affiliation & cleaned from eukaryote contamination with blastp using a custom database with fungi & stramenopiles. 10,669 cleaned peptides predicted with transdecoder and annotated with eggnog-mapper.

Version 1.5 contains 10,439 peptides, after removing 230 peptides with high identity (97% to 100%) with Tribonema gayanum RNA-seq (unpublished).

Funding

MSC-IF 704566 & ERC 322669

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