pntd.0010306.s007.xlsx (13.26 kB)
Outgroups used for phylogenetic tree rooting.
dataset
posted on 2022-03-28, 17:30 authored by Zoe Anne Dyson, Elisheba Malau, Paul F. Horwood, Rebecca Ford, Valentine Siba, Mition Yoannes, William Pomat, Megan Passey, Louise M. Judd, Danielle J. Ingle, Deborah A. Williamson, Gordon Dougan, Andrew R. Greenhill, Kathryn E. Holt(XLSX)
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third generation cephalosporinssystemic infection causedphenotypic data demonstratedpapua new guineahomologous recombination adjacentgenetic variation amongcontinued genomic surveillanceamr associated genotypestyphi populations circulatingtyphi isolates collectedtreating typhoid feversalmonella enterica typhi population appearspng genotype 2typhoid feversalmonella amr ),serovar typhisingle genotypegenotype 2twentieth centurytrimoxazole ),transmission dynamicsstill lackrelated infrastructureprophage acquisitionpopulation structureparticularly throughoutpacific islandsmolecular mechanismsindonesian archipelagoincome settingsgenetically conservedestablished populationeffective optiondetailed understandingcountry transmissionconjugate vaccinesbioinformatic analysisbased overviewantimicrobial resistance
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