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Omnitrophota marker gene trees
dataset
posted on 2022-08-14, 04:15 authored by Cale SeymourCale Seymour, Marike PalmerMarike Palmer, Eric D. Becraft, Ramunas Stepanauskas, Ariel D. Friel, Frederik SchulzFrederik Schulz, Tanja Woyke, Emiley Eloe-Fadrosh, Dengxun Lai, Jian-Yu Jiao, Zheng-Shuang Hua, Lan Liu, Zheng-Han Lian, Wen-Jun Li, Maria Chuvochina, Brianna Finley, Benjamin J. Koch, Duane P. Moser, Bruce A. Hungate, Brian P. HedlundPhylogenetic trees associated with Omnitrophota marker genes. All trees are newick format.
rooted-16-tree.nwk : Rooted 16S rRNA gene tree.
bac120-alignment-hmq-trimal.faa.treefile: Bac120 marker alignment of high and medium quality species cluster representatives.
bcg110-alignment-hmq-trimal.faa.treefile: "Bacterial core genome" bcg110 marker alignment of high and medium quality species cluster representatives.
ubcg-alignment-hmq-trimal.faa.treefile: "Up-to-date bacterial core genome" ubcg marker alignment of high and medium quality species cluster representatives.
uni56-alignment-hmq-trimal.faa.treefile: "universal" 56 marker alignment of high and medium quality species cluster representatives.
