posted on 2018-12-21, 00:00authored byAlexander F. Pozharskii, Valery A. Ozeryanskii, Ekaterina A. Filatova, Olga V. Dyablo, Olga G. Pogosova, Gennady S. Borodkin, Aleksander Filarowski, Dmitriy V. Steglenko
9-Dimethylaminobenzo[g]indoles 3–6 and 1-dimethylamino-8-(pyrrolyl-1)naphthalene 7 were examined as possible models for establishing the ability
of
the pyrrole nitrogen atom to participate in [NHN]+ hydrogen
bonding as a proton acceptor. Indoles 3–5 (to a lesser extent 6) form rather stable tetrafluoroborates,
with the proton mostly located on the NMe2 group but simultaneously
engaged in the formation of a charged intramolecular [NHN]+ hydrogen bond (IHB) with the pyrrole N atom. The theoretically estimated
energies of IHB in salts 3H+BF4––6H+BF4– vary between
7.0–10.7 and 6.2–7.0 kcal mol–1 in
vapor and MeCN, respectively. The pyrrole N atom undergoes a perceptible
pyramidalization but still remains involved in the 6π-electron
aromatic system, suggesting that the hydrogen bonding in salts 3H+BF4––6H+BF4– represents a previously unknown mixed NH···N(n,π)
interaction. Despite the favorable orientation of the N–H bond
and the pyrrole ring in salt 7H+BF4–, no signs of NH···N(n) bonding in it were noticed,
and the existing interaction was classified as pure NH···N(π).
The results obtained may be useful in studies of secondary protein
structures, especially those α-helix sections which contain
tryptophan residues.