Metabolite BridgeDb ID Mapping Database (20181224)
datasetposted on 24.12.2018 by De Sl
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
BridgeDb ID mapping database for metabolites, using HMDB 4.0 (Release of 29-09-2018), ChEBI 170 (Release of 03 Dec. 2018), and Wikidata (24 Dec. 2018) as data sources.
Several updated mappings, with additional test to eliminate double mappings in WikiPathways (from Wikidata to any other type of included database) and additional test cases in the test pathway from WikiPathways (https://www.wikipathways.org/index.php/Pathway:WP2582).
This work was funded by ELIXIR, the research infrastructure for life-science data.