13068_2017_700_MOESM4_ESM.xlsx (47.39 kB)
MOESM4 of Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments
dataset
posted on 2017-02-07, 05:00 authored by Paul Daly, Jolanda Munster, Martin Blythe, Roger Ibbett, Matt Kokolski, Sanyasi Gaddipati, Erika Lindquist, Vasanth Singan, Kerrie Barry, Anna Lipzen, Chew Ngan, Christopher Petzold, Leanne Chan, Steven Pullan, StÊphane Delmas, Paul Waldron, Igor Grigoriev, Gregory Tucker, Blake Simmons, David ArcherAdditional file 4: Table S3. Genes in Venn diagram and pectin related gene expression. The file contains lists, identity and expression values of the genes in different parts of the Venn diagram in Fig. 5a and the expression patterns of the genes annotated by Martens-Uzunova and Schaap [35] acting on pectin. Induced was considered as significantly higher transcript abundance (DESeq p adj < 0.05 log2 FC of ⼠3) on lignocellulose compared to the glucose control, along with FPKM of ⼠50 on lignocellulose.