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LocationInteractions_EID2

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posted on 2015-05-27, 14:10 authored by Maya WardehMaya Wardeh, Claire Risley, Marie McIntyre, Christian Setzkorn, Matthew Baylis
Location interactions indicate the possibility of a species being found in a location.

Locations were interpreted at two levels: country and region.

Regions correspond to first administrative divisions

(e.g., states (USA), departments (France,) home nations of the United Kingdom, etc.)

Evidence for these interactions was extracted from NCBI sequences database and

NCBI PubMed database.

This dataset comprises the following fields:

1 Species: name of species.
2 Species classification: the taxonomic classification of the Species.
3 Country: official name of the country
4 Region: where available the official name of the region (sub-country) part of the location is listed under this header.

5 Sequences count: Total number of nucleotide sequences supporting the interaction.

6 Publication count: Total number of PubMed publications supporting the interaction.

7 Sequences: semi colon separated list of the nucleotide sequence identifiers (GIs) that can be used to retrieve these sequences from the NCBI Nucleotide database. For readability purposes this list was restricted to a maximum of 100 identifiers.

8 Publications: semi colon separated list of the PubMed citation identifiers (PMIDs) that can be used to retrieve these publications from the NCBI PubMed database. For readability purposes this list was restricted to a maximum of 100 identifiers.

 

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