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HybriSeq data code and figures

Version 2 2025-03-18, 22:05
Version 1 2023-08-04, 22:55
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posted on 2025-03-18, 22:05 authored by Daniel FoytDaniel Foyt, David Brown, Shuqin Zhou, Bo Huang, Brittany Moser, Qin Zhu, Zev J. Gartner

We have developed the HybriSeq method for single-cell RNA profiling, which utilizes in situ hybridization of multiple probes for targeted transcripts, followed by split-pool barcoding and sequencing analysis of the probes. We have shown that HybriSeq can achieve high sensitivity for RNA detection with multiple probes and profile entire transcripts without an end bias. The utility of HybriSeq is demonstrated in characterizing cell-to-cell heterogeneities of a panel of 196 genes in peripheral blood mononuclear cells and the detection of missed annotations of transcripts.

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