Evolutionary analysis of SPX-containing genes in plantae
Gene sequences and classification of SPX-containing genes in 49 representative plant species
Main authors for correspondence:
Keke Yi, Chinese Academy of Agricultural Sciences
yikeke@gmail.com
Yiyong Zhu, Nanjing Agricultural University
yiyong1973@njau.edu.cn
Long Wang, Nanjing Agricultural University; Chinese Academy of Agricultural Sciences
wanglongqhu@qq.com
Xianqing Jia, Chinese Academy of Agricultural Sciences
jiaxianqing@caas.cn
File list:
1. Sequences of the whole genome proteins of 49 selected species: protein_sequences.zip
2. Interproscan results of the whole genome proteins of 49 selected species: Interproscan_results.whole_genome.zip
3. Sequences of SPX-containing proteins : 49_species.SPX-containing.pep.fa
P.S.
1. Phylogeny tree of SPX-containing genes from 49 selected plant species could be found here:
https://itol.embl.de/tree/20211940236266511594463324
2. Pipelines for phylogeny construction could be found here:
https://github.com/jiaxianqing/Pipelines/tree/master/Phylogeny_construction
