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EHR data from patients with AML and AML-Simiar diseases

dataset
posted on 2024-12-04, 10:56 authored by Chang SunChang Sun

This describes the datasets used for training and evaluation Onto-CGAN model sourced from the MIMIC-IV Clinical Database V2.2. The query script used for data extraction is listed below. Due to the restricted access policies of the MIMIC database, we are unable to publish the extracted subset of MIMIC data. However, researchers with authorized access to the MIMIC-IV database may request the experimental patient data from the corresponding author.


SQL Query in MIMIC

SELECT DISTINCT diag_table.subject_id, diag_table.icd_code, diag_table.hadm_id, patients_table.gender, patients_table.anchor_age, omr_table.result_name, omr_table.result_value,patients_table.dod

FROM `physionet-data.mimiciv_hosp.diagnoses_icd` AS diag_table

JOIN `physionet-data.mimiciv_hosp.patients` AS patients_table ON diag_table.subject_id = patients_table.subject_id

JOIN `physionet-data.mimiciv_hosp.omr` AS omr_table ON diag_table.subject_id = omr_table.subject_id

WHERE diag_table.icd_code LIKE '20%'

Funding

REALM (Real-world dataenabled assessment for health regulatory decision-making), a project funded by Horizon Europe with a grant number 10109543

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