ECCITE-seq protein and mRNA counts

dataset

posted on 2020-01-21, 04:27 authored by Gennady GorinGennady Gorin, Valentine SvenssonValentine Svensson, Lior PachterLior Pachter

Protein data were acquired from https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM3596101, file GSM3596101_CTCL-ADT-count.csv.gz.

velocyto processing:

velocyto run (bam directory)/(BAM file).bam (transcriptome directory)/genes/genes.gtf

History

Usage metrics

Categories

Bioinformatics and computational biology not elsewhere classified

Keywords

ECCITE-seq protein rna spliced unspliced count Computational Biology

Licence

Exports