3 files

Domestication of Campylobacter jejuni NCTC 11168

posted on 03.06.2019, 13:19 by Ben Pascoe, Samuel K. Sheppard, Lisa K. Williams

While the model organism allows basic comparison within and between labs, it is important to remember the effect even small differences in isolate genomes can have on the validity and reproducibility of experimental work. We quantify differences in 23 reference Campylobacter genomes and compare them with observable differences in common laboratory phenotypes.

Supplementary data

Table S1: Isolate list

Table S2: Isolates used for genomic context

File S1: wgMLST output for all isolates

File S2: Alignment file: NCTC11168 isolates only.

File S3: Alignment file: NCTC11168 isolates and 83 previously published genomes.

File S4: SNP matrix

File S5: Summary of Gubbins output.