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Differential transcript usage in the Parkinson's disease brain
Version 4 2020-09-11, 11:14
Version 3 2020-09-11, 11:12
Version 2 2020-09-11, 11:11
Version 1 2020-09-11, 09:55
dataset
posted on 2020-09-11, 11:14 authored by Fiona DickFiona Dick, Gonzalo S. Nido, Gry Hilde Nilsen, Guido Alves, Ole-Bjørn Tysnes, Christian Dölle, Charalampos TzoulisRaw data and findings of:
"Differential transcript usage in the Parkinson's disease brain".
Code to reproduce findings at: https://github.com/fifdick/DTUinPDbrain
- "DTU_events.txt" contains result statistics of both DRIMSeq and DEXSeq for all transcripts
- "TPM_mat.txt" contains TPMs (after using tximport) for all transcripts. Additional column indicates whether the transcript was removed from further down-stream analysis or survived pre-filtering
-"sample_info.txt" contains the meta-data file used to run the DTU analysis with the code
provided. (Covariates and condition)
Funding
Neuro-SysMed: A Systems Medicine Approach to Restructure Norwegian Clinical Neurology
The Research Council of Norway
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