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Development of Scalable and Generalizable Machine Learned Force Field for Polymers

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posted on 2022-12-13, 23:40 authored by Shaswat Mohanty, James StevensonJames Stevenson, Andrea R. Browning, Leif D. Jacobson, Karl Leswing, Mathew D. Halls, Mohammad Atif Faiz Afzal

This is a dataset of 344,654 clusters of ethylene glycol EG, diethylene glycol (EG)2, and triethylene glycol EG(3), along with DFT labels at the wB97X-D3BJ/def2-TZVPD level of theory.


The primary key for each datapoint is a string representing an index from 0 to 344,653 inclusive. Each datapoint is a dictionary containing the following keys:


* atomicNumbers: atomic number of each atom

* charge: net charge for each system, in elementary charges (always 0 for this dataset)

* datasetTitle: indicates the sampling step which produced this data, out of the following six options:

    * EG_run: initial cluster sampling of EG, (EG)2, and (EG)3

    * decomp_EG_monomer: decomposition sampling for EG

    * decomp_EG_dimer: decomposition sampling for (EG)2

    * decomp_EG_trimer: decomposition sampling for (EG)3

    * active_one: first active learning round

    * active_two: second active learning round

* elements: element for each atom (same info as atomicNumbers)

* labels: for this dataset, always 'wB97X-D3BJ__def2-TZVPD', containing within the following keys:

    * atomizationEnergy: total energy with fitted per-atom atomic energies removed, in Hartree (H: -31.91939585331449, C: -6.840292406034887, O: -12.5395523076437)

    * dipoleMoment: DFT system dipole moment, in e-Angstroms

    * gradient: energy gradient dE/dx (negative of atomic forces), in Hartree/Angstrom

    * totalEnergy: total energy from wB97X-D3BJ/def2-TZVPD, in Hartree

    * xtbCharges: xtb partial charges, in elementary charge units

* multiplicity: spin multiplicity for each system (always 1 for this dataset)

* positions: xyz coordinates of atomic nuclei, in Angstroms


Authors:

Shaswat Mohanty,

James Stevenson,

Andrea Browning,

Leif Jacobson,

Karl Leswing,

Mathew D. Halls,

Mohammad Atif Faiz Afzal

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