Demographic and spatially-explicit landscape genomic analyses in a tropical oak reveal the impacts of late Quaternary climate change on Andean montane forests
posted on 2023-02-22, 08:12authored byJoaquin OrtegoJoaquin Ortego, Josep Maria Espelta, Dolors Armenteras, Maria Claudia Diez, Alberto Munoz, Raul Bonal
Samples.xlsx: Description of individual and population codes used in the different analyses and genomic datasets.
p7r08m5minMAF001.str: Input file used to perform genetic clustering (STRUCTURE) and principal component (PCA) analyses.
p7r08m5minMAF001.arp: Input file used to perform ARLEQUIN analyses.
Occurrence.csv: Occurrence data used for environmental niche modelling (ENM).
FASTSIMCOAL2.zip: This ZIP folder contains input files for the four models of population divergence run in FASTSIMCOAL2.
STAIRWAYPLOT.zip: This ZIP folder contains input files for demographic reconstructions in STAIRWAY PLOT.
SPLATCHE2.zip: This ZIP folder contains input files for the three spatially-explicit demographic models run using SPLATCHE2.