Dataset: Analysis of the installability and archival stability of omics computational tools - Raw Data
Version 3 2019-02-19, 11:32
Version 2 2019-02-04, 00:12
Version 1 2019-02-03, 21:57
dataset
posted on 2019-02-19, 11:32 authored by Serghei MangulSerghei Mangul, Thiago MosqueiroThiago Mosqueiro, Dat Duong, Keith Mitchell, Varuni Sarwal, Brian Hill, Jaqueline BritoJaqueline Brito, Russell Jared Littman, Benjamin Statz, Angela Ka-Mei Lam, Gargi Dayama, Laura Grieneisen, Lana S. Martin, Jonathan Flint, Eleazar Eskin, Ran BlekhmanWe downloaded open access papers via PubMed from 10 systems and computational biology journals. We provide in this repository raw data in XML format.
Our approach to extract software links from the downloaded papers and verify the archival stability of links is described in the Methods section of the paper. Timeout links were manually verified. Links extracted from the abstracts and the body of the surveyed papers (n=48,393) are available in CSV format here.
For more information, please visit our main repository:
https://github.com/smangul1/good.software
