2 files

Data associated with "Applying genotyping-by-sequencing data to uncover copy number variation: a proof of concept using a soybean fast neutron mutant population "

posted on 24.09.2018 by Marc-André Lemay, Davoud Torkamaneh, Guillem Rigaill, Brian Boyle, Adrian O. Stec, Robert M. Stupar, François Belzile
These data represent read counts in different genomic windows obtained from genotyping-by-sequencing of a set of soybean fast neutron mutants and four controls. A manuscript related to these data has been submitted for publication. Array comparative genomic hybridization data and raw sequence reads are available through NCBI BioProject number PRJNA486165. A package has been developed to analyze these data and is available on GitHub (github.com/malemay/delgbs).

The abstract and reference of the article will be added here once the manuscript is accepted for publication.


This work was supported in part by the SoyaGen grant (www.soyagen.ca) awarded to F. Belzile and funded by Génome Québec, Genome Canada, the government of Canada, the Ministère de l’Économie, Science et Innovation du Québec, Semences Prograin Inc., Syngenta Canada Inc., Sevita Genetics, Coop Fédérée, Grain Farmers of Ontario, Saskatchewan Pulse Growers, Manitoba Pulse & Soybean Growers, the Canadian Field Crop Research Alliance and Producteurs de grains du Québec. It was also funded in part through a National Science Foundation grant (#1444581) to R. M. Stupar. M-A. Lemay is supported by a NSERC Canada Vanier Graduate Scholarship and a scholarship from the AgroPhytoSciences NSERC CREATE Training Program.