Data Sheet S4 - Fragments Per Kilobase of Target Per Million Mapped Reads (FPKM) of each CSW1.1 depth profile metagenomic sample from CROMO, California, USA May 2016.xlsx (345.17 kB)
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Data Sheet S4 - Fragments Per Kilobase of Target Per Million Mapped Reads (FPKM) of each CSW1.1 depth profile metagenomic sample from CROMO, California, USA May 2016

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posted on 05.05.2021, 17:56 authored by Mary SabudaMary Sabuda
Data in this sheet are normalized metagenomic data presented as Fragments Per Kilobase of Target Per Million Mapped Reads (FPKM) from five depths in the CSW1.1 well at the Coast Range Ophiolite Microbial Observatory, California, USA collected during a one-day sampling event in May 2016. Metagenomic data was sequenced, library prep was performed, and quality control was done at the University of Utah before assembly using Megahit and prediction using Prodigal. Mapping of sequence reads was done using Bowtie2 and FPKM was calculated using the seq-annot package. Data was collected to identify the genes present at each depth in the profile.

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NASA Astrobiology Institute CAN-7 Rock Powered Life Grant NNA15BB02A

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