CpG Analysis of Intergenic Regions in Pangolin-CoV (Pangolin Guangdong/2019)

This project analyzes the distribution of CpG sites in the intergenic regions of the Pangolin-CoV (Pangolin Guangdong/2019) genome. Key outputs include:

- Tab-delimited file with CpG counts and observed/expected (O/E) ratios for each intergenic region.

- Visualizations:

- Bar chart showing CpG counts across regions.

- Line plot illustrating O/E ratios.

The analysis provides insights into the genomic characteristics of Pangolin-CoV and highlights regions with potential functional significance.