<p dir="ltr">Supporting datasets and R scripts for Carini et al. 2026</p><p dir="ltr">Excel datasets: Larval shell length, larval shell thickness, field pH.</p><p dir="ltr">R scripts: chromatograms.R= create TIC chromatograms, create_expr_objects.R= create MSnSet objects, larval_differences.R= all analyses other than proteomics, MSNID_filter.R= filtering protein identifications, prot_expr_analysis.R= differential protein expression analysis.</p><p dir="ltr">Fasta files: treatment_proteome.fa= full sequences of filtered treatment shell proteome, control_proteome.fa= full sequences of filtered control shell proteome</p><p dir="ltr">Further details regarding the datasets can be found in the readme file.</p><p><br></p>
