Updated on 12th January 2021
This update fixes inaccurate estimations of the proportion of non-susceptible isolates of E. coli and K. pneumoniae
for ampicillin (page 9-10 and page 18-21 in the AMR surveillance report) in AMASS 1.0. The updated AMR surveillance report and output files were
generated by AMASS 1.1 using the same data sets and data dictionary
files. AMASS 1.1 (figshare link
https://figshare.com/articles/dataset/AMASS_zip/7763330) fixes a typo in the R code (z_Rcode.R file) of the AMASS 1.0 that caused the
AutoMated tool for Antimicrobial resistance Surveillance System (AMASS) was developed as an offline, open-access and easy-to-use application that allows a hospital to perform data analysis independently and generate isolate-based and sample-based surveillance reports stratified by infection origin from routinely collected electronic databases. AMASS performs data analysis and generates reports automatically. The application can be downloaded from https://www.amass.website.
This is a repository of the files for Angkor Hospital for Children. The attached four files are:
1) The AMR surveillance report automatically generated from AMASS using hospital admission and microbiology data of Angkor Hospital for Children in Cambodia
2) Aggregated summary data in .csv format automatically generated from AMASS
3) Data dictionary for microbiology data file of Angkor Hospital for Children (configured by the hospital to be used with the AMASS application)
4) Data dictionary for hospital admission data of Angkor Hospital for Children (configured by the hospital to be used with the AMASS application)
Please note that the two data dictionary files can be re-used with the data files of the hospital in the future in cases when variables names and values in the raw data remained unchanged.