All Identified transcripts and list of differentially expressed genes in time course RNA-Seq.

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posted on 2024-09-06, 17:51 authored by Iman Hadizadeh, Bahram Peivastegan, Kåre Lehmann Nielsen, Petri Auvinen, Nina Sipari, Minna Pirhonen

Transcripts at 1-, 24- and 168-hours post-inoculation in time course RNA-Seq data of potato tubers inoculated with Serratia plymuthica with or without Dickeya solani identified with NOISeq with p-value < 0.05 and −2 ≥ log 2-fold change ≥ 2.

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transcriptome analysis unravels strong inhibitory action soft rot pathogens establish symbiotic relationship div >< p cell wall structure cell wall remodeling initiate plant priming induced resistance relied microbial recognition system highlighting a30 ’a30 actively interferes tripartite interaction among characterized transcriptome changes jasmonic acid signaling acetic acid signaling serratia plymuthica dickeya solani related genes expression defense signaling mediated potato tubers inoculated solani plymuthica plant immunity genes involved salicylic acid gibberellic acid defense signaling abscisic acid potato tubers potato tuber detoxification system biocontrol system a30 influenced a30 coincided preserving dormancy late phases late phase inhibiting stress host resistance highly stimulated endophytic colonization endophytic bacterium effective colonization delaying sprouting cold conditions biocontrol mechanism antimicrobial metabolites affects durability

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