40168_2020_989_MOESM3_ESM.xlsx (6.61 MB)
Download fileAdditional file 3 of Taxonomic and functional analyses of intact microbial communities thriving in extreme, astrobiology-relevant, anoxic sites
dataset
posted on 2021-04-16, 10:36 authored by Alexandra Kristin Bashir, Lisa Wink, Stefanie Duller, Petra Schwendner, Charles Cockell, Petra Rettberg, Alexander Mahnert, Kristina Beblo-Vranesevic, Maria Bohmeier, Elke Rabbow, Frederic Gaboyer, Frances Westall, Nicolas Walter, Patricia Cabezas, Laura Garcia-Descalzo, Felipe Gomez, Mustapha Malki, Ricardo Amils, Pascale Ehrenfreund, Euan Monaghan, Pauline Vannier, Viggo Marteinsson, Armin Erlacher, George Tanski, Jens Strauss, Mina Bashir, Andreas Riedo, Christine Moissl-EichingerAdditional file 2: Supplementary Table 1: Description of the MASE sampling sites. Supplementary Table 2: RSV table resulted by the "universal" primer approach. Supplementary Table 3: RSV table resulted by the "Archaea" primer approach. Supplementary Table 4: RSV table resulted by the "universal" primer approach (including negative controls). Supplementary Table 5: RSV resulted by the "Archaea" primer approach (including negative controls). Supplementary Table 6: Diversity calculations based on the archaea-targeted approach for each sampling site and biotope. Supplementary Table 7: Diversity calculations based on the microbiome data (universal dataset) for each sampling site and environment. Supplementary Table 8: Bacterial, archaeal and eukaryotic taxonomic information derived from the metagenomics dataset. Supplementary Table 9: Comparison with metagenomic datasets from non-MASE sites. Supplementary table 10: Comprehensive information on isolates obtained within the frame of the MASE project and their respective environmental source. Supplementary Table 11: Core genome of retrieved genome bins.
Funding
Seventh Framework Programme
History
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