12859_2022_4643_MOESM2_ESM.csv (63.72 kB)
Download fileAdditional file 2 of Clustering biological sequences with dynamic sequence similarity threshold
dataset
posted on 2022-03-31, 03:28 authored by Jimmy Ka Ho Chiu, Rick Twee-Hee OngAdditional file 2. ALFATClust cluster evaluation report for the AMR gene sequence dataset (γlow = 0.7).
Funding
Saw Swee Hock School of Public Health, National University of Singapore
History
References
- 10.1002/widm.53
- 10.1093/bioinformatics/16.5.451
- 10.1093/bioinformatics/btn174
- 10.1093/nar/gkj448
- 10.1109/TIT.1982.1056489
- 10.1007/11941439_116
- 10.1093/nar/gkt282
- 10.1109/TSMCB.2012.2223671
- 10.1016/0377-0427%2887%2990125-7
- 10.1186/1471-2105-13-174
- 10.1093/bioinformatics/bts565
- 10.1093/bioinformatics/btl158
- 10.1093/bioinformatics/btq461
- 10.1186/1471-2105-12-271
- 10.7717/peerj.2584
- 10.1093/bioinformatics/17.3.282
- 10.1093/protein/15.8.643
- 10.1093/nar/gky315
- 10.1109/34.400568
- 10.1038/nbt.3988
- 10.1038/s41467-018-04964-5
- 10.1186/s13059-016-0997-x
- 10.1186/s13059-019-1875-0
- 10.1038/s41598-019-41695-z
- 10.1073/pnas.122653799
- 10.1103/PhysRevE.84.016114
- 10.1088/1742-5468/2008/10/P10008
- 10.1093/jac/dks261
- 10.1128/AAC.01310-13
- 10.1093/bioinformatics/bty987
- 10.1093/nar/gky1050
- 10.1109/MCSE.2007.55
- 10.1017/CBO9780511809071
- 10.1093/nar/gky834
