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Additional file 1 of Association of a 7.9 kb Endogenous Retrovirus Insertion in Intron 1 of CD36 with Obesity and Fat Measurements in Sheep

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posted on 2025-03-15, 04:32 authored by Ahmed A. Saleh, Ali Shoaib Moawad, Naisu Yang, Yao Zheng, Cai Chen, Xiaoyan Wang, Bo Gao, Chengyi Song
Additional File 1. Supplementary Tables: Table S1. The tested 57 assembled non-reference sheep genomes in addition to one reference genome. Table S2. The library included 28 ERV families sourced from LTR retrotransposons used in the current investigation. Table S3. The anticipated variations in the insertion of full-length ERVs in the genomes of sheep. Table S4. Primers utilized in PCR-Based activation tests for 31 Endogenous Retroviruses (ERVs). Table S5. Investigated Genomes for CD36 gene in sheep and eight other species. Table S6. Reference genome and 42 non-reference genomes in Sheep.Table S7. Body Condition Score (BCS). Table S8. Analysis of Endogenous Retroviruses (ERVs) in 58 sheep Genomes: Distribution and Characterization of Full-Length Sequences. Table S9. Investigating CD36 gene in sheep and eight other species. Table S9. Exploring the differentiation in Ov-ERV-R13-CD36 and CD36 gene for Reference genome and 42 non-reference genomes in Sheep. Table S11. Ov-ERV-R13-CD36 genotyping in the studied sheep breeds and population genetic parameters

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This work was supported by the National Key Research and Development Program of China (2022YFD1300201), and the High-end Talent Support Program of Yangzhou University to Chengyi Song

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