Abundance of genes found significantly differentially expressed using edgeR (FDR≤0.10) between CS- and AC-exposed mice and enriched pathways using GAGE (FDR≤0.10) exhibiting patterns detailed in S1 Fig.

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posted on 2017-06-02, 17:36 authored by Mikaela A. Miller, Thomas Danhorn, Charmion I. Cruickshank-Quinn, Sonia M. Leach, Sean Jacobson, Matthew J. Strand, Nichole A. Reisdorph, Russell P. Bowler, Irina Petrache, Katerina Kechris

<p>Normalization, filtering, and modeling was performed using data from three groups (AC, CS, and smoking cessation).</p>

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DOI - Is supplement to Gene and metabolite time-course response to cigarette smoking in mouse lung and plasma

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Keywords

smoking cessation Chronic CS exposure plasma age-matched littermate controls CS triggers COPD Whole lung RNA-seq data C 57Bl mice cigarette smoking circadian gene pathways CS exposure DNA pyrimidine metabolism lung transcriptome expression metabolite time-course response

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