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Supplemental File 9- TARDIS Notebook #1

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posted on 2022-11-09, 23:48 authored by Zachary StevensonZachary Stevenson, Megan J Moerdyk-Schauwecker, Stephen BanseStephen Banse, Dhaval S Patel, Hang Lu, Patrick C. Phillips

Notebook used for the HighSeq quality scoring, cleaning, demultiplexing, and trimming. Contains the python code used for the analysis of one individual worm from each of four TARDIS arrays (PX816, PX817, PX818 profiles 1 & 2). Contains the python code used for the analysis and visualization for all four replicates measuring the frequency from the array to the F1 integrations. Contains the python code used for the analysis and visualization of the injection mixture.

Funding

MIRA: Systems genomics of complex traits

National Institute of General Medical Sciences

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Systems variation underlying the genetics of aging

National Institute on Aging

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