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The significant genes derived from 7 ChIP-chip microarray data are displayed with the use of MultiExperiment Viewer graphical interface.

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posted on 2013-01-03, 01:03 authored by Juliane Bock, Liliana H. Mochmann, Cornelia Schlee, Nasrin Farhadi-Sartangi, Stefanie Göllner, Carsten Müller-Tidow, Claudia D. Baldus

The fold enrichment for 48 genes shared by at least 3 of ChIP-chips was uploaded to MultiExperiment Viewer to obtain a heat map representing the gene overlap of all ChIP-chips. Significantly enriched genes are >1.25 fold change with respect to the IgG control. The overlap of 48 unique genes shows that AML D, T-ALL and nBM share a greater number of enriched target genes. AML A-E are ordered with respect to ERG mRNA expression and genes are ranked according AML D P-Values.

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